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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19535542_19536384_F

Intron Information:

Intron Rank:

125322

Intron Class:

major

Intron Phase:

Intron Coordinates:

19535542 - 19536384

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

CTTTCTGTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

83.7

27.2

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

85.1

0.79

0.8

79.4

32.6

Minor 5ss

34.2

-1.8

2.9

44.9

43.2

Minor BPS

50.6

0.01

2.3

70.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042178

19527457 - 19536510

9054

ENSAPLT00000019570

19529714 - 19536510

6797