About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_195788_196579_R

Intron Information:

Intron Rank:
28
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
195788 - 196579
Intron Length:
792

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GGG|GTATGTAGG
5'SS Class:
major
3'SS Sequence:
ACTTCTGTTTTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCCCAT
U12 Branch Point Sequence:
TCTCTTTGTACT
Flanking Amino Acid:
GALERDKKDGFQQTSEHALF
Intron Amino Acid Position:
1141

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.1
0.64
1
65.3
46
Major BPS
72.3
0.55
1.2
80.7
33.2
Major PPT
75.9
0.58
0.9
73.5
36.4
Minor 5ss
40.8
-1
2.5
42.3
44.6
Minor BPS
48.8
-0
1.8
69.43
41.5

Associated Gene:

Gene:
UNC13B
Ensembl Gene ID:
ENSAPLG00000003655
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003123
161360 - 370186
208827
ENSAPLT00000003753
161360 - 353765
192406
ENSAPLT00000003128
161360 - 370186
208827