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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1960922_1961091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1960922 - 1961091

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTGT

5'SS Class:

strong_major

3'SS Sequence:

AGTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

TCTGCTTGAAAA

Flanking Amino Acid:

LGILISGQVSGGHLNPAVTF

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

37.9

Major BPS

0.2

1.2

65.3

38.6

Major PPT

82.8

0.74

0.8

36.5

Minor 5ss

40.8

-1

3.1

58.8

45.7

Minor BPS

54.1

0.12

1.7

65.08

41.5

Associated Gene:

Gene:

AQP3

Ensembl Gene ID:

ENSAPLG00000004227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004620

1952443 - 1964601

12159

ENSAPLT00000004349

1960480 - 1964050

3571