Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19611403_19616267_R

Intron Information:

Intron Rank:

152839

Intron Class:

major

Intron Phase:

Intron Coordinates:

19611403 - 19616267

Intron Length:

4865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTGATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTTGATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.1

0.72

0.9

80.6

31.5

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

80.4

0.95

0.9

85.58

26.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041865

19610982 - 19623577

12596