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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1961230_1962122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1961230 - 1962122

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCACCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TTTTTCCCACCT

Flanking Amino Acid:

GAGIVFGLYYDAIWAFGSNQ

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

72.3

0.55

73.3

28.9

Major PPT

76.1

0.59

0.8

66.5

34.6

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

50.4

0.09

2.1

80.59

41.2

Associated Gene:

Gene:

AQP3

Ensembl Gene ID:

ENSAPLG00000004227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004620

1952443 - 1964601

12159

ENSAPLT00000004349

1960480 - 1964050

3571