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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_196677_202164_R


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
196677 - 202164

Intron Length:
5488

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGC|GTGAGTGTG

5'SS Class:
major

3'SS Sequence:
GTTCCTCGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTAAC

U12 Branch Point Sequence:
CTTGCTGTAACT

Flanking Amino Acid:
AFKGKVPEYPAWFEQFVMQW

Intron Amino Acid Position:
1108

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.3
0.36
1.3
63.1
43.4

Major BPS
62.2
0.3
1.2
65
38.7

Major PPT
75
0.56
0.9
69.4
36.8

Minor 5ss
31.8
-2.1
3.2
35.6
41.4

Minor BPS
57.3
0.31
2.1
78.9
44

Associated Gene:

Gene:
UNC13B

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

161360 - 353765
192406

161360 - 370186
208827

161360 - 370186
208827