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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19806504_19816442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19806504 - 19816442

Intron Length:

9939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTGAATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTGAATT

Flanking Amino Acid:

MRHEAPVQMASAQDSRYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.4

58.8

42.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

0.9

74.2

39.4

Minor 5ss

26.1

-2.7

3.1

31.9

42.5

Minor BPS

67.3

0.62

1.3

81.06

34.6

Associated Gene:

Gene:

RAB3C

Ensembl Gene ID:

ENSAPLG00000005718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005901

19806233 - 19939303

133071