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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19985438_19986109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19985438 - 19986109

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTATTCTAATT

Flanking Amino Acid:

KHNASVEKSQVGFIDYIVHP

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.7

0.44

1.1

66.4

43.3

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

53.5

0.19

1.7

72.38

39.3

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029692

19984697 - 20279283

294587

ENSAPLT00000027354

19985027 - 20198150

213124

ENSAPLT00000022760

19985027 - 20169261

184235

ENSAPLT00000046795

19985027 - 20279283

294257

ENSAPLT00000005615

19985027 - 20004891

19865

ENSAPLT00000030836

19984697 - 20131772

147076