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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19986293_19986781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19986293 - 19986781

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CAATCTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

AGTGTAATAACA

Flanking Amino Acid:

LLDNYSDRIQVLQNMVHCAD

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

70.1

0.5

70.3

31.9

Major PPT

0.45

0.9

38.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

46.9

-0.2

1.9

60.52

38.9

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022760

19985027 - 20169261

184235

ENSAPLT00000046795

19985027 - 20279283

294257

ENSAPLT00000005615

19985027 - 20004891

19865

ENSAPLT00000030836

19984697 - 20131772

147076

ENSAPLT00000029692

19984697 - 20279283

294587

ENSAPLT00000027354

19985027 - 20198150

213124