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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19987583_19991212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19987583 - 19991212

Intron Length:

3630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GCTTTAGTAATA

Flanking Amino Acid:

GVSNQFLINTNSELALMYND

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.7

0.69

0.9

74.6

39.4

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

46.8

-0.2

2.2

60.33

40.2

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005615

19985027 - 20004891

19865

ENSAPLT00000030836

19984697 - 20131772

147076

ENSAPLT00000029692

19984697 - 20279283

294587

ENSAPLT00000027354

19985027 - 20198150

213124

ENSAPLT00000022760

19985027 - 20169261

184235

ENSAPLT00000046795

19985027 - 20279283

294257