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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19994189_19997748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19994189 - 19997748

Intron Length:

3560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTCTTTTAAAG

Flanking Amino Acid:

VSEYISNTFLDKQHEVEIPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.1

0.54

74.4

33.9

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

60.6

0.19

1.4

64.12

37.5

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029692

19984697 - 20279283

294587

ENSAPLT00000027354

19985027 - 20198150

213124

ENSAPLT00000022760

19985027 - 20169261

184235

ENSAPLT00000046795

19985027 - 20279283

294257

ENSAPLT00000005615

19985027 - 20004891

19865

ENSAPLT00000030836

19984697 - 20131772

147076