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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19997843_20004843_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19997843 - 20004843

Intron Length:

7001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

ACTAACTTATGC

Flanking Amino Acid:

LLSVSWGYIKFKRMLNRELT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

44.9

-0.4

54.35

43.3

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005615

19985027 - 20004891

19865