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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20035808_20083938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20035808 - 20083938

Intron Length:

48131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TATCTCTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

CTTTCCCTATCT

Flanking Amino Acid:

QPSINKATITEEAYQKLASE

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

81.8

0.72

0.8

76.9

31.3

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

0.49

84.68

41.9

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022760

19985027 - 20169261

184235

ENSAPLT00000046795

19985027 - 20279283

294257

ENSAPLT00000030836

19984697 - 20131772

147076

ENSAPLT00000029692

19984697 - 20279283

294587

ENSAPLT00000027354

19985027 - 20198150

213124