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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20104366_20169175_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20104366 - 20169175

Intron Length:

64810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

ATGGCATAAATC

Flanking Amino Acid:

KMRFRFLKSYSFDVDNGTSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.4

41.9

Major BPS

62.2

0.3

1.1

68.9

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

56.3

0.21

2.5

76.3

39.1

Minor BPS

46.8

-0.2

57.38

41.8

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022760

19985027 - 20169261

184235