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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20104366_20278632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20104366 - 20278632

Intron Length:

174267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

ATGGCATAAATC

Flanking Amino Acid:

NFPFRRHSWICFDVDNGTSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

62.2

0.3

1.1

68.9

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

46.8

-0.2

57.38

41.8

Associated Gene:

Gene:

PDE4D

Ensembl Gene ID:

ENSAPLG00000005416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046795

19985027 - 20279283

294257

ENSAPLT00000029692

19984697 - 20279283

294587