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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2020437_2023250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2020437 - 2023250

Intron Length:

2814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCATGCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTTTCTCTATTT

Flanking Amino Acid:

AEALGMYILMVFGLSSAAQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

66.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

62.3

0.28

55.5

39.8

Minor 5ss

31.8

-2.1

3.1

36.6

41.8

Minor BPS

53.6

0.19

1.9

75.99

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004753

2020329 - 2029689

9361