Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2023378_2025457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2023378 - 2025457

Intron Length:

2080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GTGATTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTGTTGTGATT

Flanking Amino Acid:

LGIHAAGGISGAHLNAAITI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

79.1

0.65

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

48.4

-0

2.1

73.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004753

2020329 - 2029689

9361