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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2026327_2027880_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2026327 - 2027880

Intron Length:

1554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTCTCCTGACCT

Flanking Amino Acid:

VSLLGGFFTEFMATVMLLLG

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

76.1

0.59

0.8

69.2

31.4

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

59.6

0.38

1.8

76.42

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004753

2020329 - 2029689

9361