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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2028099_2028498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2028099 - 2028498

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TGTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCAGAT

U12 Branch Point Sequence:

TCTGGCTCACCA

Flanking Amino Acid:

AIAGWGMDVFTAGNYWWWIP

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.3

71.9

33.8

Major BPS

52.7

0.07

1.1

48.6

36.6

Major PPT

86.5

0.82

0.9

84.6

Minor 5ss

28.9

-2.4

3.1

33.6

Minor BPS

44.4

-0.4

2.2

58.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004753

2020329 - 2029689

9361