Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2033381_2034887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2033381 - 2034887

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TGGTTGGTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

AACAACATAATT

Flanking Amino Acid:

VCLVYKHAKPVVSPDTEIWF

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.8

33.7

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

67.2

0.39

58.1

47.3

Minor 5ss

35.5

-1.6

3.2

47.7

Minor BPS

47.6

-0.1

1.8

62.7

40.9

Associated Gene:

Gene:

TPGS2

Ensembl Gene ID:

ENSAPLG00000004688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004839

2030607 - 2050674

20068