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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2056118_2061188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2056118 - 2061188

Intron Length:

5071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ACTTTCTAAAAC

Flanking Amino Acid:

RSTGDLTGQQVTNEGGMKSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.2

83.2

30.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

84.6

0.78

0.8

81.6

34.6

Minor 5ss

30.5

-2.2

2.5

33.7

41.5

Minor BPS

55.6

0.16

1.8

65.25

40.5

Associated Gene:

Gene:

KIAA1328

Ensembl Gene ID:

ENSAPLG00000004859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005003

2054220 - 2191930

137711