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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20684453_20690527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20684453 - 20690527

Intron Length:

6075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTAATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TGTTCTCTAATT

Flanking Amino Acid:

EDFQDDGHLYRFPPSSPLKP

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

80.1

0.68

0.9

73.5

34.7

Minor 5ss

41.4

-1

3.1

56.1

Minor BPS

69.1

0.68

1.6

85.4

34.8

Associated Gene:

Gene:

DEPDC1B

Ensembl Gene ID:

ENSAPLG00000009617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020459

20668660 - 20691054

22395

ENSAPLT00000010050

20668660 - 20691204

22545