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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20781565_20813127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20781565 - 20813127

Intron Length:

31563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTGCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTTTTTGCTATA

Flanking Amino Acid:

YRVPEHESRAGQIIPERRFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

79.5

0.73

0.9

36.9

Major PPT

84.9

0.78

0.8

80.9

31.3

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

42.8

-0.5

2.3

38.7

Associated Gene:

Gene:

NDUFAF2

Ensembl Gene ID:

ENSAPLG00000009796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010194

20781438 - 20833827

52390