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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20946639_20971011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20946639 - 20971011

Intron Length:

24373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTGCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

TTCTCGATAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

80.3

0.68

0.9

76.1

32.5

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

59.1

0.37

2.3

84.81

41.7

Associated Gene:

Gene:

ZSWIM6

Ensembl Gene ID:

ENSAPLG00000006992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047151

20946524 - 21027713

81190