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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20971369_20980647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20971369 - 20980647

Intron Length:

9279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TAGAACATAATT

Flanking Amino Acid:

SQNSEINQVHGAPDPTAGAS

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

81.9

0.72

0.9

75.8

38.2

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

49.4

0.04

1.8

68.31

42.1

Associated Gene:

Gene:

ZSWIM6

Ensembl Gene ID:

ENSAPLG00000006992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036097

20913850 - 21027713

113864

ENSAPLT00000033712

20958094 - 21027713

69620

ENSAPLT00000030079

20945803 - 21027713

81911

ENSAPLT00000047151

20946524 - 21027713

81190

ENSAPLT00000007273

20944692 - 21027713

83022

ENSAPLT00000046134

20911869 - 21027713

115845