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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_20998665_20998948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20998665 - 20998948

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TATTCCTCAATT

Flanking Amino Acid:

FDSHGWPLWHEHVPTACARV

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

73.1

0.58

73.8

32.3

Major PPT

80.1

0.68

0.7

78.3

28.8

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

77.4

0.94

1.4

89.86

34.1

Associated Gene:

Gene:

ZSWIM6

Ensembl Gene ID:

ENSAPLG00000006992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007273

20944692 - 21027713

83022

ENSAPLT00000046134

20911869 - 21027713

115845

ENSAPLT00000036097

20913850 - 21027713

113864

ENSAPLT00000033712

20958094 - 21027713

69620

ENSAPLT00000030079

20945803 - 21027713

81911

ENSAPLT00000047151

20946524 - 21027713

81190