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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21004674_21007967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21004674 - 21007967

Intron Length:

3294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCAA

5'SS Class:

major

3'SS Sequence:

CTCTTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TCTTTCCTACAG

Flanking Amino Acid:

FRKQAVFLLEAGPYSGLGEV

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

42.7

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

85.4

0.8

0.7

79.9

25.7

Minor 5ss

37.7

-1.4

3.1

49.3

46.9

Minor BPS

46.4

-0.4

2.1

56.57

44.8

Associated Gene:

Gene:

ZSWIM6

Ensembl Gene ID:

ENSAPLG00000006992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036097

20913850 - 21027713

113864

ENSAPLT00000033712

20958094 - 21027713

69620

ENSAPLT00000030079

20945803 - 21027713

81911

ENSAPLT00000047151

20946524 - 21027713

81190

ENSAPLT00000007273

20944692 - 21027713

83022

ENSAPLT00000046134

20911869 - 21027713

115845