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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2118223_2163487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2118223 - 2163487

Intron Length:

45265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTCTCTTATTG

Flanking Amino Acid:

LSGAKEKEQQVSSKKASCQQ

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

79.1

0.72

69.3

38.4

Major PPT

85.9

0.81

0.8

29.3

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

61.3

0.22

1.7

68.23

39.8

Associated Gene:

Gene:

KIAA1328

Ensembl Gene ID:

ENSAPLG00000004859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041066

2098204 - 2218414

120211

ENSAPLT00000034733

2114325 - 2218414

104090

ENSAPLT00000005003

2054220 - 2191930

137711