Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21230581_21230791_F

Intron Information:

Intron Rank:

131355

Intron Class:

major

Intron Phase:

Intron Coordinates:

21230581 - 21230791

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTGGAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTATCTTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

0.82

0.8

24.9

Major PPT

66.6

0.37

1.7

76.5

37.3

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

64.2

0.52

1.7

81.97

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047591

21230189 - 21234334

4146