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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21302929_21303776_F


Intron Information:

Intron Rank:
18

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
21302929 - 21303776

Intron Length:
848

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCTACTTC

5'SS Class:
weak_major

3'SS Sequence:
TTTCTGATTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAT

U12 Branch Point Sequence:
TATTTTCTGATT

Flanking Amino Acid:
EYDDFSPSITRVKELTVDPS

Intron Amino Acid Position:
600

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
58.5
0.2
1.3
59.1
41

Major BPS
86.7
0.91
0.7
84.2
21.8

Major PPT
79.2
0.66
0.8
74.3
35.1

Minor 5ss
49.3
-0
2.6
67.9
43.3

Minor BPS
56.2
0.28
1.6
75.66
35.1

Associated Gene:

Gene:
KIF2A

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21257494 - 21309662
52169

21257555 - 21309662
52108