Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21303928_21305488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21303928 - 21305488

Intron Length:

1561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

CTGTTGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TCTTTCCAGACT

Flanking Amino Acid:

DDLKLLCEQNEEEVSPQLFT

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

77.8

38.7

Major BPS

0.47

1.2

69.9

35.3

Major PPT

77.8

0.62

0.9

72.9

37.4

Minor 5ss

33.4

-1.9

2.8

41.6

38.2

Minor BPS

50.1

0.08

75.11

42.1

Associated Gene:

Gene:

KIF2A

Ensembl Gene ID:

ENSAPLG00000009519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006864

21257555 - 21309662

52108

ENSAPLT00000016175

21257555 - 21309662

52108

ENSAPLT00000009960

21257494 - 21309662

52169