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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21321083_21328986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21321083 - 21328986

Intron Length:

7904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GAAGTGTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

84.4

0.85

34.5

Major PPT

86.4

0.82

0.8

84.4

30.5

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

46.3

-0.2

2.1

53.37

39.2

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185