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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21329493_21332829_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21329493 - 21332829

Intron Length:

3337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTAAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTAAACA

Flanking Amino Acid:

TQPGFYSVLLNIFTNHTLDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

83.5

0.75

0.9

81.8

33.7

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

0.66

1.6

82.25

33.1

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185