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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21339289_21342667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21339289 - 21342667

Intron Length:

3379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTATTT

Flanking Amino Acid:

IANFNEPVNQIATQISVLIA

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

29.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

95.3

1.02

0.5

91.7

19.4

Minor 5ss

30.7

-2.2

3.1

40.9

45.4

Minor BPS

59.9

0.39

1.7

79.07

37.4

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009795

21320692 - 21413876

93185

ENSAPLT00000041958

21320692 - 21406341

85650