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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21347544_21348516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21347544 - 21348516

Intron Length:

973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

ATCTACACAACT

Flanking Amino Acid:

SLERTLLSLKVLRKLTVHGF

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

82.7

29.3

Major BPS

0.45

0.9

67.6

25.3

Major PPT

85.7

0.8

0.6

80.5

31.5

Minor 5ss

37.1

-1.5

49.4

46.4

Minor BPS

49.4

0.03

73.12

43.1

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185