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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21355443_21355673_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21355443 - 21355673

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

TGTGAAATAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCTTTGTGAAAT

Flanking Amino Acid:

TMWEEDPEGFTVEETGGDSW

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

69.2

35.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

0.14

1.1

49.2

42.7

Minor 5ss

-1.6

49.6

40.5

Minor BPS

2.2

73.47

43.3

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009795

21320692 - 21413876

93185

ENSAPLT00000041958

21320692 - 21406341

85650