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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21358782_21360676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21358782 - 21360676

Intron Length:

1895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

LLAELQVSHNRYKPIRRRVI

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.1

37.7

Major BPS

0.72

78.4

31.2

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

-1.1

2.9

52.8

44.1

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185