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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21362568_21362740_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

21362568 - 21362740

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

TAA|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AATGGCTTTTTAC|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TTTTCCTTAATG

Flanking Amino Acid:

RIETATTLKLTVDDFEFRTD

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

34.5

-0.9

3.4

43.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

39.2

-0.6

3.2

55.4

44.9

Minor 5ss

99.7

1.65

0.6

98.9

3.35

Minor BPS

1.09

87.41

29.8

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185