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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21369885_21371405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21369885 - 21371405

Intron Length:

1521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AATCTATTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCATCTAATC

Flanking Amino Acid:

VYLLEDGLELWLVTLENSPC

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

69.8

0.45

0.9

38.5

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

52.4

0.05

1.8

69.62

35.5

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185