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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21371483_21378932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21371483 - 21378932

Intron Length:

7450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCCTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AGTTTCTGAATT

Flanking Amino Acid:

RIFQNMSALLELSSENLKNC

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

70.5

41.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

38.5

-1.3

3.3

53.4

44.8

Minor BPS

0.64

1.4

79.89

35.7

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185