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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21387411_21404623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21387411 - 21404623

Intron Length:

17213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

TGTTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTGTTTTGAAAG

Flanking Amino Acid:

ALLSLLPSLNGVIQDKFCGI

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.4

33.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

88.4

0.86

0.8

80.8

36.8

Minor 5ss

23.9

-3

20.8

37.5

Minor BPS

49.2

-0.1

1.6

53.72

41.2

Associated Gene:

Gene:

IPO11

Ensembl Gene ID:

ENSAPLG00000009338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041958

21320692 - 21406341

85650

ENSAPLT00000009795

21320692 - 21413876

93185