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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2164174_2167056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2164174 - 2167056

Intron Length:

2883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

GCTGCATGAACA

Flanking Amino Acid:

QLHQSRMDYNRFRGHVPVLG

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

76.8

34.7

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

84.6

0.78

0.8

76.4

37.6

Minor 5ss

38.4

-1.3

2.9

49.3

46.9

Minor BPS

49.8

-0

1.9

62.34

43.3

Associated Gene:

Gene:

KIAA1328

Ensembl Gene ID:

ENSAPLG00000004859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034733

2114325 - 2218414

104090

ENSAPLT00000005003

2054220 - 2191930

137711

ENSAPLT00000041066

2098204 - 2218414

120211