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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21916038_21919776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21916038 - 21919776

Intron Length:

3739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

CTTTTTTTAATA

Flanking Amino Acid:

AKCHGKEPSDTSQPSAAAQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

70.2

0.5

72.1

Major PPT

82.9

0.74

0.8

29.6

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

75.3

0.79

1.1

33.3

Associated Gene:

Gene:

RNF180

Ensembl Gene ID:

ENSAPLG00000009315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040826

21915906 - 22002554

86649

ENSAPLT00000009693

21915906 - 21992687

76782