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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21919873_21926270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21919873 - 21926270

Intron Length:

6398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATTTT

5'SS Class:

major

3'SS Sequence:

TTTTTGTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAG

U12 Branch Point Sequence:

TTTTTGTTAATA

Flanking Amino Acid:

PEWVKCVIEKAQWTIGKLHC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

81.2

33.8

Major BPS

52.1

0.05

1.6

63.1

44.4

Major PPT

80.2

0.68

0.9

77.6

35.5

Minor 5ss

44.1

-0.6

3.3

66.4

45.1

Minor BPS

68.4

0.57

82.43

32.9

Associated Gene:

Gene:

RNF180

Ensembl Gene ID:

ENSAPLG00000009315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040826

21915906 - 22002554

86649

ENSAPLT00000009693

21915906 - 21992687

76782