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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21927222_21966076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21927222 - 21966076

Intron Length:

38855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

TTTCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TGAGCTGTAAAG

Flanking Amino Acid:

RRREQWLQKQTANDNLHTED

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

35.3

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

92.8

0.96

0.6

88.6

20.9

Minor 5ss

38.9

-1.2

3.7

57.4

41.7

Minor BPS

44.3

-0.5

2.2

49.88

Associated Gene:

Gene:

RNF180

Ensembl Gene ID:

ENSAPLG00000009315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040826

21915906 - 22002554

86649

ENSAPLT00000009693

21915906 - 21992687

76782