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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21966303_21970616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21966303 - 21970616

Intron Length:

4314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAAAAA

5'SS Class:

major

3'SS Sequence:

TTAATTATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTCCTGTTAATT

Flanking Amino Acid:

TTIARVFFQAELNNSTKSFF

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

32.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

75.8

0.58

0.9

39.3

Minor 5ss

38.2

-1.3

2.9

48.3

47.4

Minor BPS

56.5

0.28

2.1

76.4

40.9

Associated Gene:

Gene:

RNF180

Ensembl Gene ID:

ENSAPLG00000009315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040826

21915906 - 22002554

86649

ENSAPLT00000009693

21915906 - 21992687

76782