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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21970743_21992484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21970743 - 21992484

Intron Length:

21742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTATTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ACTTTTATAACA

Flanking Amino Acid:

SCKKAFRVFEAGFRRHSDTV

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

80.4

0.68

0.9

77.1

41.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

60.8

0.34

1.6

69.86

36.5

Associated Gene:

Gene:

RNF180

Ensembl Gene ID:

ENSAPLG00000009315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040826

21915906 - 22002554

86649

ENSAPLT00000009693

21915906 - 21992687

76782