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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_21992634_22002518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21992634 - 22002518

Intron Length:

9885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATAGGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

TTTTTTTCTACA

Flanking Amino Acid:

VIIYIYSVNWFIGQNTSSKR

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

58.9

40.5

Major BPS

78.3

0.7

32.1

Major PPT

95.8

1.03

0.5

19.1

Minor 5ss

29.4

-2.4

3.3

30.2

42.8

Minor BPS

57.1

0.22

1.8

74.8

36.5

Associated Gene:

Gene:

RNF180

Ensembl Gene ID:

ENSAPLG00000009315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040826

21915906 - 22002554

86649