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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22398438_22398950_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22398438 - 22398950

Intron Length:
513

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGAGTT

5'SS Class:
strong_major

3'SS Sequence:
TGTTGTATTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATGCAT

U12 Branch Point Sequence:
TTGTTTGGAACA

Flanking Amino Acid:
TRLIVLTEDQPNLEINHHAD

Intron Amino Acid Position:
312

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.5
1.02
0.7
88
25.3

Major BPS
67.2
0.43
1.4
77.7
37.1

Major PPT
80.4
0.68
0.9
74.1
40.3

Minor 5ss
36.4
-1.5
3.6
55.7
48.5

Minor BPS
49.1
-0
2.1
67.12
39.9

Associated Gene:

Gene:
ADAMTS6

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22268080 - 22420317
152238

22252832 - 22415143
162312

22268080 - 22415435
147356