About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22453160_22453387_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22453160 - 22453387

Intron Length:
228

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGCTA

5'SS Class:
major

3'SS Sequence:
TATTGGATACTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATTATTA

Flanking Amino Acid:
EEDIESHCQRRAFHKLKDEF

Intron Amino Acid Position:
172

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
64.2
41.4

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
61.1
0.25
1.1
53
45.5

Minor 5ss
40.5
-1.1
3.3
56.2
48

Minor BPS
59.9
0.31
1.8
75.92
35.5

Associated Gene:

Gene:
CENPK

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22444175 - 22468008
23834